Nice to see you working on it!
However, we must have a misunderstanding!
To wind this circuit:
(http://img.photobucket.com/albums/v81/bigbuba/Picture7-1.png)
you need to completely rewind the stator, the chokes are part of each phase winding on the stator, so instead of have 3 wires on the stator, you have 9
so instead of winding 1 wire per phase, you wind 3 wires per phase, and connect them in series, so it's like the wire goes around the stator 3 times
here is a picture of Stan's RVIC, i'm not sure if you read the whole topic, but there are new discoveries and information towards the end
(http://img.photobucket.com/albums/v81/bigbuba/RotaryVIC.jpg)
he says the end choke coils are bifilar, so, you would wind 2 wires bifilar, and one wire alone, put these together, then put them in the stator as a single phase, do this 3 times, keeping track of all your wire ends, and your wire ends go in like this:
(http://img.photobucket.com/albums/v81/bigbuba/Picture14.png)
and you have your blocking diodes in between the secondary and the top choke, and then your isolation diodes at the other end of that choke before the positive terminal
i'm not sure if you were using a 3 phase bridge, but you can't use a simple 3 phase bridge for this, because you're not using negative diodes at all, and you're blocking diodes are separate from the isolation diodes
